SHOGoiN Cell Transcriptome: GSM1677533

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677533


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T61The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 161.3363
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 79.0999
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 32.3453
4 ENSG00000204628 RACK1 receptor for activated C kinase 1 28.7643
5 ENSG00000174444 RPL4 ribosomal protein L4 28.6033
6 ENSG00000184009 ACTG1 actin gamma 1 27.4566
7 ENSG00000100316 RPL3 ribosomal protein L3 26.7055
8 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 24.2243
9 ENSG00000142541 RPL13A ribosomal protein L13a 23.8018
10 ENSG00000070756 PABPC1 poly(A) binding protein cytoplasmic 1 23.2251

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285740 novel transcript -0.1053
58502 ENSG00000285739 novel transcript, antisense to NRG3 -0.1053
58501 ENSG00000285738 Novel transcript -0.1053
58500 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1053
58499 ENSG00000285736 Novel transcript -0.1053
58498 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1053
58497 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1053
58496 ENSG00000285733 novel protein -0.1053
58495 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1053
58494 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1053

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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