SHOGoiN Cell Transcriptome: GSM1677543
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1677543 Profile download | 7000000000000000000000-766 | Sequence Read Archive | SRP050499 | SRP050499_T71 | The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells | Transcriptome | Primordial germ cell | Human | Early embryonic tissue | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000156508 | EEF1A1 | eukaryotic translation elongation factor 1 alpha 1 | 87.3558 |
| 2 | ENSG00000133112 | TPT1 | tumor protein, translationally-controlled 1 | 60.0253 |
| 3 | ENSG00000196230 | TUBB | tubulin beta class I | 46.3662 |
| 4 | ENSG00000168028 | RPSA | ribosomal protein SA | 45.0916 |
| 5 | ENSG00000089157 | RPLP0 | ribosomal protein lateral stalk subunit P0 | 42.5958 |
| 6 | ENSG00000070756 | PABPC1 | poly(A) binding protein cytoplasmic 1 | 39.0104 |
| 7 | ENSG00000080824 | HSP90AA1 | heat shock protein 90 alpha family class A member 1 | 38.1387 |
| 8 | ENSG00000273149 | novel transcript, antisense to TPT1 | 30.9720 | |
| 9 | ENSG00000137154 | RPS6 | ribosomal protein S6 | 30.3758 |
| 10 | ENSG00000174444 | RPL4 | ribosomal protein L4 | 30.3306 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285742 | novel transcript | -0.1371 | |
| 58502 | ENSG00000285741 | novel transcript | -0.1371 | |
| 58501 | ENSG00000285740 | novel transcript | -0.1371 | |
| 58500 | ENSG00000285739 | novel transcript, antisense to NRG3 | -0.1371 | |
| 58499 | ENSG00000285738 | Novel transcript | -0.1371 | |
| 58498 | ENSG00000285737 | LINC02680 | long intergenic non-protein coding RNA 2680 | -0.1371 |
| 58497 | ENSG00000285736 | Novel transcript | -0.1371 | |
| 58496 | ENSG00000285735 | LINC02717 | long intergenic non-protein coding RNA 2717 | -0.1371 |
| 58495 | ENSG00000285734 | novel transcript, antisense to CACNA1C | -0.1371 | |
| 58494 | ENSG00000285733 | novel protein | -0.1371 |
