Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677543

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677543


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T71The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 87.3558
2 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 60.0253
3 ENSG00000196230 TUBB tubulin beta class I 46.3662
4 ENSG00000168028 RPSA ribosomal protein SA 45.0916
5 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 42.5958
6 ENSG00000070756 PABPC1 poly(A) binding protein cytoplasmic 1 39.0104
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 38.1387
8 ENSG00000273149 novel transcript, antisense to TPT1 30.9720
9 ENSG00000137154 RPS6 ribosomal protein S6 30.3758
10 ENSG00000174444 RPL4 ribosomal protein L4 30.3306

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.1371
58502 ENSG00000285741 novel transcript -0.1371
58501 ENSG00000285740 novel transcript -0.1371
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.1371
58499 ENSG00000285738 Novel transcript -0.1371
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1371
58497 ENSG00000285736 Novel transcript -0.1371
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1371
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1371
58494 ENSG00000285733 novel protein -0.1371

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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