SHOGoiN Cell Transcriptome: GSM1677548

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677548


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T76The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 74.7565
2 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 73.4795
3 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 48.7112
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 43.5563
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 43.0796
6 ENSG00000273149 novel transcript, antisense to TPT1 40.4256
7 ENSG00000196230 TUBB tubulin beta class I 37.3951
8 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 35.0000
9 ENSG00000070756 PABPC1 poly(A) binding protein cytoplasmic 1 30.6219
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 29.4920

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285744 novel transcript -0.1429
58502 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.1429
58501 ENSG00000285742 novel transcript -0.1429
58500 ENSG00000285741 novel transcript -0.1429
58499 ENSG00000285740 novel transcript -0.1429
58498 ENSG00000285739 novel transcript, antisense to NRG3 -0.1429
58497 ENSG00000285738 Novel transcript -0.1429
58496 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1429
58495 ENSG00000285736 Novel transcript -0.1429
58494 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1429

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...