SHOGoiN Cell Transcriptome: GSM1677549
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1677549 Profile download | 7000000000000000000000-766 | Sequence Read Archive | SRP050499 | SRP050499_T77 | The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells | Transcriptome | Primordial germ cell | Human | Early embryonic tissue | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000156508 | EEF1A1 | eukaryotic translation elongation factor 1 alpha 1 | 63.2972 |
| 2 | ENSG00000196230 | TUBB | tubulin beta class I | 61.5294 |
| 3 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 52.4739 |
| 4 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 52.0076 |
| 5 | ENSG00000133112 | TPT1 | tumor protein, translationally-controlled 1 | 42.7352 |
| 6 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S rRNA | 41.5314 |
| 7 | ENSG00000133606 | MKRN1 | makorin ring finger protein 1 | 26.4787 |
| 8 | ENSG00000184009 | ACTG1 | actin gamma 1 | 26.2184 |
| 9 | ENSG00000080824 | HSP90AA1 | heat shock protein 90 alpha family class A member 1 | 24.5808 |
| 10 | ENSG00000198786 | MT-ND5 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 | 23.7458 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285738 | Novel transcript | -0.1456 | |
| 58502 | ENSG00000285737 | LINC02680 | long intergenic non-protein coding RNA 2680 | -0.1456 |
| 58501 | ENSG00000285736 | Novel transcript | -0.1456 | |
| 58500 | ENSG00000285735 | LINC02717 | long intergenic non-protein coding RNA 2717 | -0.1456 |
| 58499 | ENSG00000285734 | novel transcript, antisense to CACNA1C | -0.1456 | |
| 58498 | ENSG00000285733 | novel protein | -0.1456 | |
| 58497 | ENSG00000285732 | novel transcript, antisense to ABCD2 | -0.1456 | |
| 58496 | ENSG00000285731 | Novel transcript, antisense to TBC1D5 | -0.1456 | |
| 58495 | ENSG00000285730 | novel transcript | -0.1456 | |
| 58494 | ENSG00000285729 | novel transcript | -0.1456 |
