SHOGoiN Cell Transcriptome: GSM1677549
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1677549 Profile download | 7000000000000000000000-766 | Sequence Read Archive | SRP050499 | SRP050499_T77 | The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells | Transcriptome | Primordial germ cell | Human | Early embryonic tissue | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000156508 | EEF1A1 | eukaryotic translation elongation factor 1 alpha 1 | 63.2972 |
| 2 | ENSG00000196230 | TUBB | tubulin beta class I | 61.5294 |
| 3 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 52.4739 |
| 4 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 52.0076 |
| 5 | ENSG00000133112 | TPT1 | tumor protein, translationally-controlled 1 | 42.7352 |
| 6 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S RNA | 41.5314 |
| 7 | ENSG00000133606 | MKRN1 | makorin ring finger protein 1 | 26.4787 |
| 8 | ENSG00000184009 | ACTG1 | actin gamma 1 | 26.2184 |
| 9 | ENSG00000080824 | HSP90AA1 | heat shock protein 90 alpha family class A member 1 | 24.5808 |
| 10 | ENSG00000198786 | MT-ND5 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 | 23.7458 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58735 | ENSG00000285994 | novel transcript, sense intronic to CAMK1D | -0.1456 | |
| 58734 | ENSG00000285993 | novel transcript, antisense to RNF165 | -0.1456 | |
| 58733 | ENSG00000285992 | novel transcript | -0.1456 | |
| 58732 | ENSG00000285991 | novel transcript | -0.1456 | |
| 58731 | ENSG00000285990 | neurobeachin (NBEA) pseudogene | -0.1456 | |
| 58730 | ENSG00000285989 | TEC | -0.1456 | |
| 58729 | ENSG00000285988 | novel transcript, LINP1-LINC00707 readthrough | -0.1456 | |
| 58728 | ENSG00000285987 | NA | -0.1456 | |
| 58727 | ENSG00000285986 | complement factor H related 3 (CFHR3) pseudogene | -0.1456 | |
| 58726 | ENSG00000285985 | NA | -0.1456 |
