SHOGoiN Cell Transcriptome: GSM1677553

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677553


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T81The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 119.7550
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 116.2841
3 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 47.0761
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 46.1271
5 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 40.3451
6 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 39.4664
7 ENSG00000174444 RPL4 ribosomal protein L4 37.1641
8 ENSG00000184009 ACTG1 actin gamma 1 35.4067
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 33.4559
10 ENSG00000137154 RPS6 ribosomal protein S6 31.4525

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285741 novel transcript -0.0848
58502 ENSG00000285740 novel transcript -0.0848
58501 ENSG00000285739 novel transcript, antisense to NRG3 -0.0848
58500 ENSG00000285738 Novel transcript -0.0848
58499 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0848
58498 ENSG00000285736 Novel transcript -0.0848
58497 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0848
58496 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0848
58495 ENSG00000285733 novel protein -0.0848
58494 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0848

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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