SHOGoiN Cell Transcriptome: GSM1677561

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677561


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T89The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 144.4089
2 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 77.8029
3 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 56.6155
4 ENSG00000174444 RPL4 ribosomal protein L4 46.0548
5 ENSG00000137154 RPS6 ribosomal protein S6 45.6843
6 ENSG00000148303 RPL7A ribosomal protein L7a 44.6388
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 35.3089
8 ENSG00000184009 ACTG1 actin gamma 1 34.8722
9 ENSG00000204628 RACK1 receptor for activated C kinase 1 34.3958
10 ENSG00000100316 RPL3 ribosomal protein L3 32.3710

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0917
58502 ENSG00000285738 Novel transcript -0.0917
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0917
58500 ENSG00000285736 Novel transcript -0.0917
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0917
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0917
58497 ENSG00000285733 novel protein -0.0917
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0917
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0917
58494 ENSG00000285730 novel transcript -0.0917

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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