SHOGoiN Cell Transcriptome: GSM1677563

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677563


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T91The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 161.2208
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 79.5848
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 44.7222
4 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 41.0448
5 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 40.4134
6 ENSG00000100316 RPL3 ribosomal protein L3 31.2072
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 29.5263
8 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 28.6945
9 ENSG00000174444 RPL4 ribosomal protein L4 26.5913
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 24.7952

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0974
58502 ENSG00000285738 Novel transcript -0.0974
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0974
58500 ENSG00000285736 Novel transcript -0.0974
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0974
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0974
58497 ENSG00000285733 novel protein -0.0974
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0974
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0974
58494 ENSG00000285730 novel transcript -0.0974

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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