Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1677582

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677582


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T110The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 130.7455
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 87.0494
3 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 61.2554
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 45.2950
5 ENSG00000184009 ACTG1 actin gamma 1 39.3586
6 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 38.2438
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 38.1648
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 33.6034
9 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 31.2205
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 29.6551

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285627 novel transcript, antisense to ADIPOR2 -0.1244
58502 ENSG00000285626 NA -0.1244
58501 ENSG00000285625 novel protein -0.1244
58500 ENSG00000285624 novel transcript -0.1244
58499 ENSG00000285623 novel transcript -0.1244
58498 ENSG00000285622 novel transcript -0.1244
58497 ENSG00000285621 novel transcript, antisense to STARD13 -0.1244
58496 ENSG00000285620 Putative protein FAM90A16P/FAM90A17P -0.1244
58495 ENSG00000285619 Novel transcript, antisense to EEFSEC -0.1244
58494 ENSG00000285618 novel transcript, antisense to ADGRV1 -0.1244

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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