SHOGoiN Cell Transcriptome: GSM1677584

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677584


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T112The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 128.1607
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 91.0988
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 55.1350
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 53.6283
5 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 50.7223
6 ENSG00000184009 ACTG1 actin gamma 1 45.1162
7 ENSG00000196230 TUBB tubulin beta class I 40.9213
8 ENSG00000168028 RPSA ribosomal protein SA 37.2455
9 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 25.4634
10 ENSG00000152234 ATP5F1A ATP synthase F1 subunit alpha 25.3262

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.1087
58502 ENSG00000285742 novel transcript -0.1087
58501 ENSG00000285741 novel transcript -0.1087
58500 ENSG00000285740 novel transcript -0.1087
58499 ENSG00000285739 novel transcript, antisense to NRG3 -0.1087
58498 ENSG00000285738 Novel transcript -0.1087
58497 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1087
58496 ENSG00000285736 Novel transcript -0.1087
58495 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1087
58494 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1087

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...