SHOGoiN Cell Transcriptome: GSM1677592

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677592


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T120The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 169.4839
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 111.8993
3 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 50.9705
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 43.8211
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 41.5148
6 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 36.0679
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 35.5391
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 30.2369
9 ENSG00000184009 ACTG1 actin gamma 1 28.9775
10 ENSG00000100316 RPL3 ribosomal protein L3 24.9204

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285740 novel transcript -0.0506
58502 ENSG00000285739 novel transcript, antisense to NRG3 -0.0506
58501 ENSG00000285738 Novel transcript -0.0506
58500 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0506
58499 ENSG00000285736 Novel transcript -0.0506
58498 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0506
58497 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0506
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0506
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0506
58494 ENSG00000285730 novel transcript -0.0506

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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