SHOGoiN Cell Transcriptome: GSM1677595

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677595


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T123The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 173.2328
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 118.9914
3 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 79.5078
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 41.6657
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 40.1402
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 40.0979
7 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 31.7969
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 20.6078
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 17.1030
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 13.7116

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0313
58502 ENSG00000285742 novel transcript -0.0313
58501 ENSG00000285741 novel transcript -0.0313
58500 ENSG00000285740 novel transcript -0.0313
58499 ENSG00000285739 novel transcript, antisense to NRG3 -0.0313
58498 ENSG00000285738 Novel transcript -0.0313
58497 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0313
58496 ENSG00000285736 Novel transcript -0.0313
58495 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0313
58494 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0313

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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