SHOGoiN Cell Transcriptome: GSM1677766

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677766


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7100400010000000000000-875Sequence Read ArchiveSRP050499SRP050499_T294The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomeGonadal somatic cellHumanGenitaliaRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 166.0283
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 60.0549
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 56.7598
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 52.5406
5 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 37.9040
6 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 36.9929
7 ENSG00000184009 ACTG1 actin gamma 1 33.2635
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 29.1717
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 25.6350
10 ENSG00000170345 FOS Fos proto-oncogene, AP-1 transcription factor subunit 25.5142

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0852
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0852
58733 ENSG00000285992 novel transcript -0.0852
58732 ENSG00000285991 novel transcript -0.0852
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0852
58730 ENSG00000285989 TEC -0.0852
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0852
58728 ENSG00000285987 NA -0.0852
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0852
58726 ENSG00000285985 NA -0.0852

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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