Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1822022

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1822022


Profile download
6000001010000000000000-734Sequence Read ArchiveSRP061185SRP061185_T1Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage primingTranscriptomeMesenchymal stem cell (MSC)MouseBone marrowRNA-SeqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000029580 Actb actin, beta 132.9112
2 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 126.0871
3 ENSMUSG00000102349 Gm37376 predicted gene, 37376 82.2173
4 ENSMUSG00000020368 Canx calnexin 31.2796
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 24.9429
6 ENSMUSG00000021427 Ssr1 signal sequence receptor, alpha 23.5618
7 ENSMUSG00000001131 Timp1 tissue inhibitor of metalloproteinase 1 21.0433
8 ENSMUSG00000030245 Golt1b golgi transport 1B 20.7184
9 ENSMUSG00000060935 Tmem263 transmembrane protein 263 19.4998
10 ENSMUSG00000017009 Sdc4 syndecan 4 19.2561

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0791
54188 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0791
54187 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0791
54186 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0791
54185 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.0791
54184 ENSMUSG00000116974 Gm49761 predicted gene, 49761 -0.0791
54183 ENSMUSG00000116973 AV205837 expressed sequence AV205837 -0.0791
54182 ENSMUSG00000116972 Gm6278 predicted gene 6278 -0.0791
54181 ENSMUSG00000116971 Gm49766 predicted gene, 49766 -0.0791
54180 ENSMUSG00000116970 Gm49796 predicted gene, 49796 -0.0791

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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