Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1822025

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1822025


Profile download
6000001010000000000000-734Sequence Read ArchiveSRP061185SRP061185_T4Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage primingTranscriptomeMesenchymal stem cell (MSC)MouseBone marrowRNA-SeqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 126.2677
2 ENSMUSG00000102349 Gm37376 predicted gene, 37376 89.2094
3 ENSMUSG00000074743 Thbd thrombomodulin 54.2010
4 ENSMUSG00000020368 Canx calnexin 42.6253
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 41.1382
6 ENSMUSG00000029580 Actb actin, beta 35.1494
7 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 32.8583
8 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 31.3712
9 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 24.2168
10 ENSMUSG00000060802 B2m beta-2 microglobulin 24.1364

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116981 Gm49611 predicted gene, 49611 -0.1002
54188 ENSMUSG00000116980 Gm49597 predicted gene, 49597 -0.1002
54187 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.1002
54186 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.1002
54185 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.1002
54184 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.1002
54183 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.1002
54182 ENSMUSG00000116974 Gm49761 predicted gene, 49761 -0.1002
54181 ENSMUSG00000116973 AV205837 expressed sequence AV205837 -0.1002
54180 ENSMUSG00000116971 Gm49766 predicted gene, 49766 -0.1002

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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