SHOGoiN Cell Transcriptome: GSM1846966

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846966


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T18Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 187.5478
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 41.0660
3 ENSG00000075624 ACTB actin beta 36.8136
4 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 30.6094
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.8674
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 26.0302
7 ENSG00000074800 ENO1 enolase 1 24.6792
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 23.4002
9 ENSG00000087086 FTL ferritin light chain 19.8260
10 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 19.6018

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285729 novel transcript -0.1100
58502 ENSG00000285727 novel transcript -0.1100
58501 ENSG00000285726 novel transcript -0.1100
58500 ENSG00000285725 novel transcript -0.1100
58499 ENSG00000285724 novel transcript -0.1100
58498 ENSG00000285723 novel protein -0.1100
58497 ENSG00000285722 novel transcript -0.1100
58495 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.1100
58494 ENSG00000285719 novel transcript, antisense to CD34 -0.1100
10 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 19.6018

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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