Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM2041916

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2041916


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3110001010000000000000Sequence Read ArchiveSRP068586SRP068586_T1Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeBone marrow cellMouseBone marrowRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 220.2837
2 ENSMUSG00000050029 Rap2c RAP2C, member of RAS oncogene family 49.4166
3 ENSMUSG00000075015 Gm10801 predicted gene 10801 25.7574
4 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 24.6706
5 ENSMUSG00000025959 Klf7 Kruppel-like factor 7 (ubiquitous) 18.8603
6 ENSMUSG00000095280 Gm21738 predicted gene, 21738 15.3351
7 ENSMUSG00000106106 18s RNA, related sequence 5 14.4573
8 ENSMUSG00000048148 Nwd1 NACHT and WD repeat domain containing 1 11.9075
9 ENSMUSG00000025873 Faf2 Fas associated factor family member 2 11.3919
10 ENSMUSG00000050966 Lin28a lin-28 homolog A (C. elegans) 10.1100

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116982 4930567J20Rik RIKEN cDNA 4930567J20 gene -0.0197
54188 ENSMUSG00000116981 Gm49611 predicted gene, 49611 -0.0197
54187 ENSMUSG00000116980 Gm49597 predicted gene, 49597 -0.0197
54186 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0197
54185 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0197
54184 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0197
54183 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0197
54182 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.0197
54181 ENSMUSG00000116974 Gm49761 predicted gene, 49761 -0.0197
54180 ENSMUSG00000116973 AV205837 expressed sequence AV205837 -0.0197

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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