Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM2041919

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2041919


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3110001010000000000000Sequence Read ArchiveSRP068586SRP068586_T4Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeBone marrow cellMouseBone marrowRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 227.9043
2 ENSMUSG00000075015 Gm10801 predicted gene 10801 29.9244
3 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 26.4765
4 ENSMUSG00000095280 Gm21738 predicted gene, 21738 14.1973
5 ENSMUSG00000008730 Hipk1 homeodomain interacting protein kinase 1 10.7494
6 ENSMUSG00000026335 Pam peptidylglycine alpha-amidating monooxygenase 6.6362
8 ENSMUSG00000003226 Ranbp2 RAN binding protein 2 4.7610
9 ENSMUSG00000022263 Trio triple functional domain (PTPRF interacting) 4.6400
10 ENSMUSG00000036214 Znrd1as zinc ribbon domain containing 1, antisense 4.2771
54180 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0176

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116986 Gm17804 predicted gene, 17804 -0.0176
54188 ENSMUSG00000116985 Gm49669 predicted gene, 49669 -0.0176
54187 ENSMUSG00000116984 4930549P19Rik RIKEN cDNA 4930549P19 gene -0.0176
54186 ENSMUSG00000116983 4930553J12Rik RIKEN cDNA 4930553J12 gene -0.0176
54185 ENSMUSG00000116982 4930567J20Rik RIKEN cDNA 4930567J20 gene -0.0176
54184 ENSMUSG00000116981 Gm49611 predicted gene, 49611 -0.0176
54183 ENSMUSG00000116980 Gm49597 predicted gene, 49597 -0.0176
54182 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0176
54181 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0176
54180 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0176

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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