Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM2041921

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2041921


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3110001010000000000000Sequence Read ArchiveSRP068586SRP068586_T6Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeBone marrow cellMouseBone marrowRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 185.5318
2 ENSMUSG00000053214 Gm9899 predicted gene 9899 63.0968
3 ENSMUSG00000016534 Lamp2 lysosomal-associated membrane protein 2 61.1897
4 ENSMUSG00000048109 Rbm15 RNA binding motif protein 15 41.5467
5 ENSMUSG00000028649 Macf1 microtubule-actin crosslinking factor 1 40.0211
6 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 35.4441
7 ENSMUSG00000075015 Gm10801 predicted gene 10801 33.1556
8 ENSMUSG00000020273 Papolg poly(A) polymerase gamma 30.4856
9 ENSMUSG00000051747 Ttn titin 26.8622
10 ENSMUSG00000022604 Cep97 centrosomal protein 97 26.6715

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116984 4930549P19Rik RIKEN cDNA 4930549P19 gene -0.0278
54188 ENSMUSG00000116983 4930553J12Rik RIKEN cDNA 4930553J12 gene -0.0278
54187 ENSMUSG00000116982 4930567J20Rik RIKEN cDNA 4930567J20 gene -0.0278
54186 ENSMUSG00000116981 Gm49611 predicted gene, 49611 -0.0278
54185 ENSMUSG00000116980 Gm49597 predicted gene, 49597 -0.0278
54184 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0278
54183 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0278
54182 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0278
54181 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0278
54180 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.0278

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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