Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM2041926

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2041926


Profile download
3110001010000000000000Sequence Read ArchiveSRP068586SRP068586_T11Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeBone marrow cellMouseBone marrowRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 230.3490
2 ENSMUSG00000075015 Gm10801 predicted gene 10801 25.8774
3 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 20.0752
4 ENSMUSG00000095280 Gm21738 predicted gene, 21738 12.8467
5 ENSMUSG00000102349 Gm37376 predicted gene, 37376 4.7755
6 ENSMUSG00000020368 Canx calnexin 4.6782
7 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 3.7922
8 ENSMUSG00000019961 Tmpo thymopoietin 3.4897
9 ENSMUSG00000106106 18s RNA, related sequence 5 3.3276
10 ENSMUSG00000008730 Hipk1 homeodomain interacting protein kinase 1 3.3060

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0111
54188 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0111
54187 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0111
54186 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0111
54185 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.0111
54184 ENSMUSG00000116974 Gm49761 predicted gene, 49761 -0.0111
54183 ENSMUSG00000116973 AV205837 expressed sequence AV205837 -0.0111
54182 ENSMUSG00000116972 Gm6278 predicted gene 6278 -0.0111
54181 ENSMUSG00000116971 Gm49766 predicted gene, 49766 -0.0111
54180 ENSMUSG00000116970 Gm49796 predicted gene, 49796 -0.0111

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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