Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM2041927

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2041927


Profile download
3110001010000000000000Sequence Read ArchiveSRP068586SRP068586_T12Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeBone marrow cellMouseBone marrowRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 175.2059
2 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 102.1775
3 ENSMUSG00000030541 Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial 66.0058
4 ENSMUSG00000008730 Hipk1 homeodomain interacting protein kinase 1 36.8219
5 ENSMUSG00000075015 Gm10801 predicted gene 10801 28.7381
6 ENSMUSG00000029580 Actb actin, beta 25.5868
7 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 24.4907
9 ENSMUSG00000106106 18s RNA, related sequence 5 17.0919
10 ENSMUSG00000085715 Tsix X (inactive)-specific transcript, opposite strand 14.0776
54180 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0348

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116985 Gm49669 predicted gene, 49669 -0.0348
54188 ENSMUSG00000116984 4930549P19Rik RIKEN cDNA 4930549P19 gene -0.0348
54187 ENSMUSG00000116983 4930553J12Rik RIKEN cDNA 4930553J12 gene -0.0348
54186 ENSMUSG00000116982 4930567J20Rik RIKEN cDNA 4930567J20 gene -0.0348
54185 ENSMUSG00000116981 Gm49611 predicted gene, 49611 -0.0348
54184 ENSMUSG00000116980 Gm49597 predicted gene, 49597 -0.0348
54183 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0348
54182 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0348
54181 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0348
54180 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0348

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...