Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM2041929

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2041929


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3110001010000000000000Sequence Read ArchiveSRP068586SRP068586_T14Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeBone marrow cellMouseBone marrowRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 231.6682
2 ENSMUSG00000075015 Gm10801 predicted gene 10801 24.4978
3 ENSMUSG00000095280 Gm21738 predicted gene, 21738 13.5628
4 ENSMUSG00000106106 18s RNA, related sequence 5 4.1875
5 ENSMUSG00000029372 Ppbp pro-platelet basic protein 3.9893
6 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 2.2659
7 ENSMUSG00000095891 Gm10717 predicted gene 10717 2.0074
8 ENSMUSG00000040152 Thbs1 thrombospondin 1 1.5076
9 ENSMUSG00000029580 Actb actin, beta 1.3611
10 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 1.1371

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.0090
54188 ENSMUSG00000116974 Gm49761 predicted gene, 49761 -0.0090
54187 ENSMUSG00000116973 AV205837 expressed sequence AV205837 -0.0090
54186 ENSMUSG00000116972 Gm6278 predicted gene 6278 -0.0090
54185 ENSMUSG00000116971 Gm49766 predicted gene, 49766 -0.0090
54184 ENSMUSG00000116970 Gm49796 predicted gene, 49796 -0.0090
54183 ENSMUSG00000116969 Gm19771 predicted gene, 19771 -0.0090
54182 ENSMUSG00000116968 Gm49587 predicted gene, 49587 -0.0090
54181 ENSMUSG00000116967 Smim34 small integral membrane protein 34 -0.0090
54180 ENSMUSG00000116966 Gm18550 predicted gene, 18550 -0.0090

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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