Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM2041931

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2041931


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3110001010000000000000Sequence Read ArchiveSRP068586SRP068586_T16Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeBone marrow cellMouseBone marrowRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 231.0710
2 ENSMUSG00000075015 Gm10801 predicted gene 10801 24.6280
3 ENSMUSG00000095280 Gm21738 predicted gene, 21738 15.6445
4 ENSMUSG00000106106 18s RNA, related sequence 5 6.0566
5 ENSMUSG00000008730 Hipk1 homeodomain interacting protein kinase 1 5.2506
6 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 4.1959
7 ENSMUSG00000022283 Pabpc1 poly(A) binding protein, cytoplasmic 1 4.1484
8 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 3.4611
9 ENSMUSG00000030126 Tmcc1 transmembrane and coiled coil domains 1 2.8566
10 ENSMUSG00000029580 Actb actin, beta 2.6551

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116983 4930553J12Rik RIKEN cDNA 4930553J12 gene -0.0115
54188 ENSMUSG00000116982 4930567J20Rik RIKEN cDNA 4930567J20 gene -0.0115
54187 ENSMUSG00000116981 Gm49611 predicted gene, 49611 -0.0115
54186 ENSMUSG00000116980 Gm49597 predicted gene, 49597 -0.0115
54185 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0115
54184 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0115
54183 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0115
54182 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0115
54181 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.0115
54180 ENSMUSG00000116974 Gm49761 predicted gene, 49761 -0.0115

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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