SHOGoiN Cell Transcriptome: GSM2063607

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2063607


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3110001010000000000000Sequence Read ArchiveSRP070425SRP070425_T176Use of the Fluidigm C1 platform for RNA sequencing of single mouse pancreatic islet cellsTranscriptomePancreatic islet cell (Pancreatic islet)MousePancreasRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 164.0888
2 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 93.7575
3 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 88.7394
4 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 74.2263
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 55.6909
6 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 27.7125
7 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 23.0425
8 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 22.7348
9 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 21.7232
10 ENSMUSG00000000215 Ins2 insulin II 4.8817

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116985 Gm49669 predicted gene, 49669 -0.0110
54188 ENSMUSG00000116984 4930549P19Rik RIKEN cDNA 4930549P19 gene -0.0110
54187 ENSMUSG00000116983 4930553J12Rik RIKEN cDNA 4930553J12 gene -0.0110
54186 ENSMUSG00000116982 4930567J20Rik RIKEN cDNA 4930567J20 gene -0.0110
54185 ENSMUSG00000116981 Gm49611 predicted gene, 49611 -0.0110
54184 ENSMUSG00000116980 Gm49597 predicted gene, 49597 -0.0110
54183 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0110
54182 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0110
54181 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0110
54180 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0110

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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