SHOGoiN Cell Transcriptome: GSM2063629

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2063629


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3110001010000000000000Sequence Read ArchiveSRP070425SRP070425_T198Use of the Fluidigm C1 platform for RNA sequencing of single mouse pancreatic islet cellsTranscriptomePancreatic islet cell (Pancreatic islet)MousePancreasRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000000215 Ins2 insulin II 201.6750
2 ENSMUSG00000041681 Iapp islet amyloid polypeptide 86.4487
3 ENSMUSG00000035804 Ins1 insulin I 41.6461
4 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 31.9733
5 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 29.1164
6 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 21.3756
7 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 19.2362
8 ENSMUSG00000102349 Gm37376 predicted gene, 37376 17.1140
9 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 14.8839
10 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 14.8450

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0316
54188 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0316
54187 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.0316
54186 ENSMUSG00000116974 Gm49761 predicted gene, 49761 -0.0316
54185 ENSMUSG00000116973 AV205837 expressed sequence AV205837 -0.0316
54184 ENSMUSG00000116972 Gm6278 predicted gene 6278 -0.0316
54183 ENSMUSG00000116971 Gm49766 predicted gene, 49766 -0.0316
54182 ENSMUSG00000116970 Gm49796 predicted gene, 49796 -0.0316
54181 ENSMUSG00000116969 Gm19771 predicted gene, 19771 -0.0316
54180 ENSMUSG00000116968 Gm49587 predicted gene, 49587 -0.0316

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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