Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM2077292

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2077292


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6000001010000000000000-724Sequence Read ArchiveSRP068586SRP068586_T19Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeHematopoietic stem cellMouseBone marrowRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 199.0325
2 ENSMUSG00000027306 Nusap1 nucleolar and spindle associated protein 1 63.6027
3 ENSMUSG00000106106 18s RNA, related sequence 5 49.4545
4 ENSMUSG00000075015 Gm10801 predicted gene 10801 42.4213
5 ENSMUSG00000075376 Rc3h2 ring finger and CCCH-type zinc finger domains 2 36.5331
6 ENSMUSG00000076548 Igkv4-69 immunoglobulin kappa variable 4-69 29.6634
7 ENSMUSG00000037400 Atp11b ATPase, class VI, type 11B 25.1655
8 ENSMUSG00000027176 Cstf3 cleavage stimulation factor, 3' pre-RNA, subunit 3 22.2213
9 ENSMUSG00000041846 Ppp4r3a protein phosphatase 4 regulatory subunit 3A 18.8683
10 ENSMUSG00000006586 Runx1t1 RUNX1 translocation partner 1 17.1509

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116984 4930549P19Rik RIKEN cDNA 4930549P19 gene -0.0232
54188 ENSMUSG00000116983 4930553J12Rik RIKEN cDNA 4930553J12 gene -0.0232
54187 ENSMUSG00000116982 4930567J20Rik RIKEN cDNA 4930567J20 gene -0.0232
54186 ENSMUSG00000116981 Gm49611 predicted gene, 49611 -0.0232
54185 ENSMUSG00000116980 Gm49597 predicted gene, 49597 -0.0232
54184 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0232
54183 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0232
54182 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0232
54181 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0232
54180 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.0232

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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