Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM2077293

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2077293


Profile download
6000001010000000000000-724Sequence Read ArchiveSRP068586SRP068586_T20Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeHematopoietic stem cellMouseBone marrowRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000035202 Lars2 leucyl-tRNA synthetase, mitochondrial 233.5187
2 ENSMUSG00000000001 Gnai3 guanine nucleotide binding protein (G protein), alpha inhibiting 3 -0.0043
3 ENSMUSG00000000003 Pbsn probasin -0.0043
4 ENSMUSG00000000028 Cdc45 cell division cycle 45 -0.0043
5 ENSMUSG00000000031 H19 H19, imprinted maternally expressed transcript -0.0043
6 ENSMUSG00000000037 Scml2 Scm polycomb group protein like 2 -0.0043
7 ENSMUSG00000000049 Apoh apolipoprotein H -0.0043
8 ENSMUSG00000000056 Narf nuclear prelamin A recognition factor -0.0043
9 ENSMUSG00000000058 Cav2 caveolin 2 -0.0043
10 ENSMUSG00000000078 Klf6 Kruppel-like factor 6 -0.0043

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116986 Gm17804 predicted gene, 17804 -0.0043
54188 ENSMUSG00000116985 Gm49669 predicted gene, 49669 -0.0043
54187 ENSMUSG00000116984 4930549P19Rik RIKEN cDNA 4930549P19 gene -0.0043
54186 ENSMUSG00000116983 4930553J12Rik RIKEN cDNA 4930553J12 gene -0.0043
54185 ENSMUSG00000116982 4930567J20Rik RIKEN cDNA 4930567J20 gene -0.0043
54184 ENSMUSG00000116981 Gm49611 predicted gene, 49611 -0.0043
54183 ENSMUSG00000116980 Gm49597 predicted gene, 49597 -0.0043
54182 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0043
54181 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0043
54180 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0043

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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