Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM2077294

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2077294


Profile download
6000001010000000000000-724Sequence Read ArchiveSRP068586SRP068586_T21Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeHematopoietic stem cellMouseBone marrowRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000106106 18s RNA, related sequence 5 199.6545
2 ENSMUSG00000075014 Gm10800 predicted gene 10800 119.1434
3 ENSMUSG00000075015 Gm10801 predicted gene 10801 12.0056
4 ENSMUSG00000095280 Gm21738 predicted gene, 21738 7.9203
5 ENSMUSG00000085715 Tsix X (inactive)-specific transcript, opposite strand 5.5427
6 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 5.2537
7 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 3.5328
8 ENSMUSG00000058174 Gm5148 predicted gene 5148 3.3489
9 ENSMUSG00000035202 Lars2 leucyl-tRNA synthetase, mitochondrial 2.9680
10 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 2.7447

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116983 4930553J12Rik RIKEN cDNA 4930553J12 gene -0.0139
54188 ENSMUSG00000116982 4930567J20Rik RIKEN cDNA 4930567J20 gene -0.0139
54187 ENSMUSG00000116981 Gm49611 predicted gene, 49611 -0.0139
54186 ENSMUSG00000116980 Gm49597 predicted gene, 49597 -0.0139
54185 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0139
54184 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0139
54183 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0139
54182 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0139
54181 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.0139
54180 ENSMUSG00000116974 Gm49761 predicted gene, 49761 -0.0139

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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