Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM2077296

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2077296


Profile download
6000001010000000000000-724Sequence Read ArchiveSRP068586SRP068586_T23Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeHematopoietic stem cellMouseBone marrowRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 228.6246
2 ENSMUSG00000075015 Gm10801 predicted gene 10801 24.4353
3 ENSMUSG00000095280 Gm21738 predicted gene, 21738 19.3863
4 ENSMUSG00000041459 Tardbp TAR DNA binding protein 17.0597
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 13.7927
6 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 10.1792
7 ENSMUSG00000085715 Tsix X (inactive)-specific transcript, opposite strand 9.1892
8 ENSMUSG00000106106 18s RNA, related sequence 5 7.6547
9 ENSMUSG00000022283 Pabpc1 poly(A) binding protein, cytoplasmic 1 6.6647
10 ENSMUSG00000045817 Zfp36l2 zinc finger protein 36, C3H type-like 2 5.0311

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54189 ENSMUSG00000116981 Gm49611 predicted gene, 49611 -0.0179
54188 ENSMUSG00000116980 Gm49597 predicted gene, 49597 -0.0179
54187 ENSMUSG00000116979 Gm32865 predicted gene, 32865 -0.0179
54186 ENSMUSG00000116978 Gm49765 predicted gene, 49765 -0.0179
54185 ENSMUSG00000116977 Gm49637 predicted gene, 49637 -0.0179
54184 ENSMUSG00000116976 4930500H12Rik RIKEN cDNA 4930500H12 gene -0.0179
54183 ENSMUSG00000116975 4930470H14Rik RIKEN cDNA 4930470H14 gene -0.0179
54182 ENSMUSG00000116974 Gm49761 predicted gene, 49761 -0.0179
54181 ENSMUSG00000116973 AV205837 expressed sequence AV205837 -0.0179
54180 ENSMUSG00000116972 Gm6278 predicted gene 6278 -0.0179

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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