Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM967487
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM967487
Profile download
5030206000000000000000-761
Sequence Read Archive
SRP014428
SRP014428_T11
Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
Transcriptome
Secondary oocyte (Ovarian follicle)
Mouse
Genitalia
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSMUSG00000098178
Gm42418
predicted gene, 42418
76.5050
2
ENSMUSG00000042279
H1f8
H1.8 linker histone
75.1453
3
ENSMUSG00000045291
E330021D16Rik
RIKEN cDNA E330021D16 gene
53.7807
4
ENSMUSG00000032056
Btg4
BTG anti-proliferation factor 4
40.4707
5
ENSMUSG00000041359
Tcl1
T cell lymphoma breakpoint 1
40.2261
6
ENSMUSG00000032191
Bcl2l10
Bcl2-like 10
38.8875
7
ENSMUSG00000018238
Gdf9
growth differentiation factor 9
33.8861
8
ENSMUSG00000050810
Oog3
oogenesin 3
29.1356
9
ENSMUSG00000075023
Accsl
1-aminocyclopropane-1-carboxylate synthase (non-functional)-like
28.5320
10
ENSMUSG00000032623
Oas1d
2'-5' oligoadenylate synthetase 1D
28.3996
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
54189
ENSMUSG00000116920
Gm49575
predicted gene, 49575
-0.1372
54188
ENSMUSG00000116919
Gm17809
predicted gene, 17809
-0.1372
54187
ENSMUSG00000116918
Gm49578
predicted gene, 49578
-0.1372
54186
ENSMUSG00000116917
Gm49653
predicted gene, 49653
-0.1372
54185
ENSMUSG00000116916
Gm34967
predicted gene, 34967
-0.1372
54184
ENSMUSG00000116915
Gm17900
predicted gene, 17900
-0.1372
54183
ENSMUSG00000116914
Gm20942
predicted gene, 20942
-0.1372
54182
ENSMUSG00000116913
Gm49566
predicted gene, 49566
-0.1372
54181
ENSMUSG00000116911
Gm5964
predicted gene 5964
-0.1372
54180
ENSMUSG00000116910
Gm49670
predicted gene, 49670
-0.1372
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
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