SHOGoiN Cell Transcriptome: GSM967489
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM967489 Profile download | 5030206000000000000000-761 | Sequence Read Archive | SRP014428 | SRP014428_T13 | Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells | Transcriptome | Secondary oocyte (Ovarian follicle) | Mouse | Genitalia | RNA-seq | HiSeq 2000 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSMUSG00000042279 | H1foo | H1 histone family, member O, oocyte-specific | 64.6826 |
| 2 | ENSMUSG00000045291 | E330021D16Rik | RIKEN cDNA E330021D16 gene | 60.1232 |
| 3 | ENSMUSG00000098178 | Gm42418 | predicted gene, 42418 | 54.0136 |
| 4 | ENSMUSG00000032056 | Btg4 | B cell translocation gene 4 | 47.0440 |
| 5 | ENSMUSG00000041359 | Tcl1 | T cell lymphoma breakpoint 1 | 43.8190 |
| 6 | ENSMUSG00000032191 | Bcl2l10 | Bcl2-like 10 | 41.3527 |
| 7 | ENSMUSG00000018238 | Gdf9 | growth differentiation factor 9 | 40.1611 |
| 8 | ENSMUSG00000050810 | Oog3 | oogenesin 3 | 32.4243 |
| 9 | ENSMUSG00000021395 | Spin1 | spindlin 1 | 31.9169 |
| 10 | ENSMUSG00000032623 | Oas1d | 2'-5' oligoadenylate synthetase 1D | 29.0859 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 54524 | ENSMUSG00000117330 | ribosomal protein L18A (Rpl18a) pseudogene | -0.1390 | |
| 54523 | ENSMUSG00000117329 | zinc finger protein 541 (Zfp541) pseudogene | -0.1390 | |
| 54522 | ENSMUSG00000117328 | novel transcript, antisense to Smoc2 | -0.1390 | |
| 54521 | ENSMUSG00000117326 | zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene | -0.1390 | |
| 54520 | ENSMUSG00000117325 | Opa interacting protein 5 (Oip5) pseudogene | -0.1390 | |
| 54519 | ENSMUSG00000117324 | novel transcript, antisense to Dscam | -0.1390 | |
| 54518 | ENSMUSG00000117323 | novel transcript | -0.1390 | |
| 54517 | ENSMUSG00000117322 | novel transcript, antisense to Zfp213 | -0.1390 | |
| 54516 | ENSMUSG00000117321 | ribosomal protein S27 (Rps27) pseudogene | -0.1390 | |
| 54515 | ENSMUSG00000117320 | ribosomal protein S6 (Rps6) pseudogene | -0.1390 |
