Human Omics database for
the Generation of iPS and Normal Cells
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All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM967489
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM967489
Profile download
5030206000000000000000-761
Sequence Read Archive
SRP014428
SRP014428_T13
Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
Transcriptome
Secondary oocyte (Ovarian follicle)
Mouse
Genitalia
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSMUSG00000042279
H1f8
H1.8 linker histone
64.6826
2
ENSMUSG00000045291
E330021D16Rik
RIKEN cDNA E330021D16 gene
60.1232
3
ENSMUSG00000098178
Gm42418
predicted gene, 42418
54.0136
4
ENSMUSG00000032056
Btg4
BTG anti-proliferation factor 4
47.0440
5
ENSMUSG00000041359
Tcl1
T cell lymphoma breakpoint 1
43.8190
6
ENSMUSG00000032191
Bcl2l10
Bcl2-like 10
41.3527
7
ENSMUSG00000018238
Gdf9
growth differentiation factor 9
40.1611
8
ENSMUSG00000050810
Oog3
oogenesin 3
32.4243
9
ENSMUSG00000021395
Spin1
spindlin 1
31.9169
10
ENSMUSG00000032623
Oas1d
2'-5' oligoadenylate synthetase 1D
29.0859
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
54189
ENSMUSG00000116907
4930553E22Rik
RIKEN cDNA 4930553E22 gene
-0.1390
54188
ENSMUSG00000116906
Gm49572
predicted gene, 49572
-0.1390
54187
ENSMUSG00000116905
Gm49652
predicted gene, 49652
-0.1390
54186
ENSMUSG00000116904
Gm49640
predicted gene, 49640
-0.1390
54185
ENSMUSG00000116903
Gm19522
predicted gene, 19522
-0.1390
54184
ENSMUSG00000116902
Gm49660
predicted gene, 49660
-0.1390
54183
ENSMUSG00000116901
Gm49667
predicted gene, 49667
-0.1390
54182
ENSMUSG00000116899
Gm49777
predicted gene, 49777
-0.1390
54181
ENSMUSG00000116898
Gm49785
predicted gene, 49785
-0.1390
54180
ENSMUSG00000116897
Gm49647
predicted gene, 49647
-0.1390
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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