SHOGoiN Cell Transcriptome: GSM967506
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM967506 Profile download | 8010000000000000000000-004 | Sequence Read Archive | SRP014428 | SRP014428_T9 | Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells | Transcriptome | Leucocyte | Human | Blood | RNA-seq | MiSeq | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000166710 | B2M | beta-2-microglobulin | 86.2721 |
| 2 | ENSG00000149273 | RPS3 | ribosomal protein S3 | 68.8255 |
| 3 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S rRNA | 51.5917 |
| 4 | ENSG00000257621 | PSMA3-AS1 | PSMA3 antisense RNA 1 | 49.2513 |
| 5 | ENSG00000164587 | RPS14 | ribosomal protein S14 | 48.5421 |
| 6 | ENSG00000245552 | novel transcript, antisense to SESN3 | 47.3364 | |
| 7 | ENSG00000213186 | TRIM59 | tripartite motif containing 59 | 42.2301 |
| 8 | ENSG00000113810 | SMC4 | structural maintenance of chromosomes 4 | 41.8755 |
| 9 | ENSG00000009790 | TRAF3IP3 | TRAF3 interacting protein 3 | 41.7337 |
| 10 | ENSG00000111796 | KLRB1 | killer cell lectin like receptor B1 | 39.1805 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285747 | novel transcript | -0.0388 | |
| 58502 | ENSG00000285746 | putative UPF0607 protein ENSP00000383144 | -0.0388 | |
| 58501 | ENSG00000285745 | general transcription factor IIH subunit 5 (GTF2H5) pseudogene | -0.0388 | |
| 58500 | ENSG00000285744 | novel transcript | -0.0388 | |
| 58499 | ENSG00000285743 | novel transcript, LINP1-LINC00707 readthrough | -0.0388 | |
| 58498 | ENSG00000285742 | novel transcript | -0.0388 | |
| 58497 | ENSG00000285741 | novel transcript | -0.0388 | |
| 58496 | ENSG00000285740 | novel transcript | -0.0388 | |
| 58495 | ENSG00000285739 | novel transcript, antisense to NRG3 | -0.0388 | |
| 58494 | ENSG00000285738 | Novel transcript | -0.0388 |
