Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM967506
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM967506
Profile download
8010000000000000000000-004
Sequence Read Archive
SRP014428
SRP014428_T9
Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
Transcriptome
Leucocyte
Human
Blood
RNA-seq
MiSeq
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000166710
B2M
beta-2-microglobulin
86.2721
2
ENSG00000149273
RPS3
ribosomal protein S3
68.8255
3
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
51.5917
4
ENSG00000257621
PSMA3-AS1
PSMA3 antisense RNA 1
49.2513
5
ENSG00000164587
RPS14
ribosomal protein S14
48.5421
6
ENSG00000245552
novel transcript, antisense to SESN3
47.3364
7
ENSG00000213186
TRIM59
tripartite motif containing 59
42.2301
8
ENSG00000113810
SMC4
structural maintenance of chromosomes 4
41.8755
9
ENSG00000009790
TRAF3IP3
TRAF3 interacting protein 3
41.7337
10
ENSG00000111796
KLRB1
killer cell lectin like receptor B1
39.1805
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285747
novel transcript
-0.0388
58502
ENSG00000285746
putative UPF0607 protein ENSP00000383144
-0.0388
58501
ENSG00000285745
general transcription factor IIH subunit 5 (GTF2H5) pseudogene
-0.0388
58500
ENSG00000285744
novel transcript
-0.0388
58499
ENSG00000285743
novel transcript, LINP1-LINC00707 readthrough
-0.0388
58498
ENSG00000285742
novel transcript
-0.0388
58497
ENSG00000285741
novel transcript
-0.0388
58496
ENSG00000285740
novel transcript
-0.0388
58495
ENSG00000285739
novel transcript, antisense to NRG3
-0.0388
58494
ENSG00000285738
Novel transcript
-0.0388
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
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