SHOGoiN Cell Transcriptome: GSM967507

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM967507


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8010000000000000000000-004Sequence Read ArchiveSRP014428SRP014428_T10Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeLeucocyteHumanBloodRNA-seqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 216.7243
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 36.5409
3 ENSG00000166710 B2M beta-2-microglobulin 32.6001
4 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 30.6297
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 27.7835
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 27.1267
7 ENSG00000142534 RPS11 ribosomal protein S11 25.8131
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 24.4995
9 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 21.6533
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 19.6829

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285746 putative UPF0607 protein ENSP00000383144 -0.0212
58502 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0212
58501 ENSG00000285744 novel transcript -0.0212
58500 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0212
58499 ENSG00000285742 novel transcript -0.0212
58498 ENSG00000285741 novel transcript -0.0212
58497 ENSG00000285740 novel transcript -0.0212
58496 ENSG00000285739 novel transcript, antisense to NRG3 -0.0212
58495 ENSG00000285738 Novel transcript -0.0212
58494 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0212

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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