SHOGoiN Cell Transcriptome: GSM967508
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM967508 Profile download | 7020001000000000000000-715 | Sequence Read Archive | SRP014428 | SRP014428_T1 | Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells | Transcriptome | Embryonic stem cell (Inner cell mass) | Human | Early embryonic tissue | RNA-seq | Genome Analyzer IIx | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S RNA | 117.5704 |
| 2 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 75.7546 |
| 3 | ENSG00000198938 | MT-CO3 | mitochondrially encoded cytochrome c oxidase III | 66.2782 |
| 4 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 64.1782 |
| 5 | ENSG00000198727 | MT-CYB | mitochondrially encoded cytochrome b | 61.5926 |
| 6 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 55.7441 |
| 7 | ENSG00000111640 | GAPDH | glyceraldehyde-3-phosphate dehydrogenase | 32.3602 |
| 8 | ENSG00000198899 | MT-ATP6 | mitochondrially encoded ATP synthase membrane subunit 6 | 31.2839 |
| 9 | ENSG00000203396 | WDR45-like (WDR45L) pseudogene | 30.9847 | |
| 10 | ENSG00000197061 | HIST1H4C | histone cluster 1 H4 family member c | 30.2614 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58735 | ENSG00000285994 | novel transcript, sense intronic to CAMK1D | -0.0927 | |
| 58734 | ENSG00000285993 | novel transcript, antisense to RNF165 | -0.0927 | |
| 58733 | ENSG00000285992 | novel transcript | -0.0927 | |
| 58732 | ENSG00000285991 | novel transcript | -0.0927 | |
| 58731 | ENSG00000285990 | neurobeachin (NBEA) pseudogene | -0.0927 | |
| 58730 | ENSG00000285989 | TEC | -0.0927 | |
| 58729 | ENSG00000285988 | novel transcript, LINP1-LINC00707 readthrough | -0.0927 | |
| 58728 | ENSG00000285987 | NA | -0.0927 | |
| 58727 | ENSG00000285986 | complement factor H related 3 (CFHR3) pseudogene | -0.0927 | |
| 58726 | ENSG00000285985 | NA | -0.0927 |
