Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM967508

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM967508 Profile download	7020001000000000000000-715	Sequence Read Archive	SRP014428	SRP014428_T1	Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells	Transcriptome	Embryonic stem cell (Inner cell mass)	Human	Early embryonic tissue	RNA-seq	Genome Analyzer IIx	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSG00000210082	MT-RNR2	mitochondrially encoded 16S rRNA	117.5704
2	ENSG00000198804	MT-CO1	mitochondrially encoded cytochrome c oxidase I	75.7546
3	ENSG00000198938	MT-CO3	mitochondrially encoded cytochrome c oxidase III	66.2782
4	ENSG00000198712	MT-CO2	mitochondrially encoded cytochrome c oxidase II	64.1782
5	ENSG00000198727	MT-CYB	mitochondrially encoded cytochrome b	61.5926
6	ENSG00000198886	MT-ND4	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4	55.7441
7	ENSG00000111640	GAPDH	glyceraldehyde-3-phosphate dehydrogenase	32.3602
8	ENSG00000198899	MT-ATP6	mitochondrially encoded ATP synthase membrane subunit 6	31.2839
9	ENSG00000203396		WDR45-like (WDR45L) pseudogene	30.9847
10	ENSG00000197061	H4C3	H4 clustered histone 3	30.2614

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
58503	ENSG00000285737	LINC02680	long intergenic non-protein coding RNA 2680	-0.0927
58502	ENSG00000285736		Novel transcript	-0.0927
58501	ENSG00000285735	LINC02717	long intergenic non-protein coding RNA 2717	-0.0927
58500	ENSG00000285734		novel transcript, antisense to CACNA1C	-0.0927
58499	ENSG00000285733		novel protein	-0.0927
58498	ENSG00000285732		novel transcript, antisense to ABCD2	-0.0927
58497	ENSG00000285731		Novel transcript, antisense to TBC1D5	-0.0927
58496	ENSG00000285730		novel transcript	-0.0927
58495	ENSG00000285729		novel transcript	-0.0927
58494	ENSG00000285727		novel transcript	-0.0927

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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