Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM967511

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM967511


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP014428SRP014428_T4Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-seqGenome Analyzer IIxSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 96.6968
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 72.7443
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 72.3987
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 57.4155
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 56.9665
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 53.9848
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 43.0164
8 ENSG00000075624 ACTB actin beta 42.8523
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 31.7505
10 ENSG00000203396 WDR45-like (WDR45L) pseudogene 28.9803

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285738 Novel transcript -0.1052
58502 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1052
58501 ENSG00000285736 Novel transcript -0.1052
58500 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1052
58499 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1052
58498 ENSG00000285733 novel protein -0.1052
58497 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1052
58496 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1052
58495 ENSG00000285729 novel transcript -0.1052
58494 ENSG00000285727 novel transcript -0.1052

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...