SHOGoiN Cell Transcriptome: GSM967511
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM967511 Profile download | 7020001000000000000000-715 | Sequence Read Archive | SRP014428 | SRP014428_T4 | Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells | Transcriptome | Embryonic stem cell (Inner cell mass) | Human | Early embryonic tissue | RNA-seq | Genome Analyzer IIx | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S rRNA | 96.6968 |
| 2 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 72.7443 |
| 3 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 72.3987 |
| 4 | ENSG00000198938 | MT-CO3 | mitochondrially encoded cytochrome c oxidase III | 57.4155 |
| 5 | ENSG00000198727 | MT-CYB | mitochondrially encoded cytochrome b | 56.9665 |
| 6 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 53.9848 |
| 7 | ENSG00000111640 | GAPDH | glyceraldehyde-3-phosphate dehydrogenase | 43.0164 |
| 8 | ENSG00000075624 | ACTB | actin beta | 42.8523 |
| 9 | ENSG00000198899 | MT-ATP6 | mitochondrially encoded ATP synthase membrane subunit 6 | 31.7505 |
| 10 | ENSG00000203396 | WDR45-like (WDR45L) pseudogene | 28.9803 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285738 | Novel transcript | -0.1052 | |
| 58502 | ENSG00000285737 | LINC02680 | long intergenic non-protein coding RNA 2680 | -0.1052 |
| 58501 | ENSG00000285736 | Novel transcript | -0.1052 | |
| 58500 | ENSG00000285735 | LINC02717 | long intergenic non-protein coding RNA 2717 | -0.1052 |
| 58499 | ENSG00000285734 | novel transcript, antisense to CACNA1C | -0.1052 | |
| 58498 | ENSG00000285733 | novel protein | -0.1052 | |
| 58497 | ENSG00000285732 | novel transcript, antisense to ABCD2 | -0.1052 | |
| 58496 | ENSG00000285731 | Novel transcript, antisense to TBC1D5 | -0.1052 | |
| 58495 | ENSG00000285729 | novel transcript | -0.1052 | |
| 58494 | ENSG00000285727 | novel transcript | -0.1052 |
