SHOGoiN Cell Transcriptome: GSM967515

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM967515


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7020001000000000000000-715Sequence Read ArchiveSRP014428SRP014428_T8Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-seqGenome Analyzer IIxSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 108.7163
2 ENSG00000203396 WDR45-like (WDR45L) pseudogene 72.0868
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 68.3530
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 60.3187
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 46.5607
6 ENSG00000075624 ACTB actin beta 43.7679
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 43.3350
8 ENSG00000184009 ACTG1 actin gamma 1 37.7428
9 ENSG00000105372 RPS19 ribosomal protein S19 32.6720
10 ENSG00000204628 RACK1 receptor for activated C kinase 1 27.2112

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1082
58502 ENSG00000285733 novel protein -0.1082
58501 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1082
58500 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1082
58499 ENSG00000285729 novel transcript -0.1082
58498 ENSG00000285727 novel transcript -0.1082
58497 ENSG00000285726 novel transcript -0.1082
58496 ENSG00000285725 novel transcript -0.1082
58495 ENSG00000285724 novel transcript -0.1082
58494 ENSG00000285723 novel protein -0.1082

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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