SHOGoiN Cell Transcriptome: SAMN02870136

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

SAMN02870136


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8010000000000000000000-001Sequence Read ArchiveSRP043513SRP043513_T1Single Cell RNAseq data and PacBio amplicon sequencing dataTranscriptomeB cell, IgM expressing HumanBloodRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000211673 IGLV3-1 immunoglobulin lambda variable 3-1 124.7998
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 98.3253
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 89.8534
4 ENSG00000211677 IGLC2 immunoglobulin lambda constant 2 81.9974
5 ENSG00000211895 IGHA1 immunoglobulin heavy constant alpha 1 48.9363
6 ENSG00000211938 IGHV3-7 immunoglobulin heavy variable 3-7 36.5722
7 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 35.8875
8 ENSG00000166710 B2M beta-2-microglobulin 35.3040
9 ENSG00000166598 HSP90B1 heat shock protein 90 beta family member 1 34.5639
10 ENSG00000132465 JCHAIN joining chain of multimeric IgA and IgM 33.0000

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285741 novel transcript -0.0475
58502 ENSG00000285740 novel transcript -0.0475
58501 ENSG00000285739 novel transcript, antisense to NRG3 -0.0475
58500 ENSG00000285738 Novel transcript -0.0475
58499 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0475
58498 ENSG00000285736 Novel transcript -0.0475
58497 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0475
58496 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0475
58495 ENSG00000285733 novel protein -0.0475
58494 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0475

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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