Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: SAMN02870137
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
SAMN02870137
Profile download
8010000000000000000000-001
Sequence Read Archive
SRP043513
SRP043513_T2
Single Cell RNAseq data and PacBio amplicon sequencing data
Transcriptome
B cell, IgA expressing
Human
Blood
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000132465
JCHAIN
joining chain of multimeric IgA and IgM
137.5573
2
ENSG00000211677
IGLC2
immunoglobulin lambda constant 2
118.5723
3
ENSG00000211899
IGHM
immunoglobulin heavy constant mu
93.9168
4
ENSG00000211648
IGLV1-47
immunoglobulin lambda variable 1-47
87.3776
5
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
50.4986
6
ENSG00000251562
MALAT1
metastasis associated lung adenocarcinoma transcript 1
40.1096
7
ENSG00000198804
MT-CO1
mitochondrially encoded cytochrome c oxidase I
26.4893
8
ENSG00000132464
ENAM
enamelin
24.3003
9
ENSG00000198712
MT-CO2
mitochondrially encoded cytochrome c oxidase II
19.9224
10
ENSG00000198727
MT-CYB
mitochondrially encoded cytochrome b
15.1970
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285747
novel transcript
-0.0286
58502
ENSG00000285746
putative UPF0607 protein ENSP00000383144
-0.0286
58501
ENSG00000285745
general transcription factor IIH subunit 5 (GTF2H5) pseudogene
-0.0286
58500
ENSG00000285744
novel transcript
-0.0286
58499
ENSG00000285743
novel transcript, LINP1-LINC00707 readthrough
-0.0286
58498
ENSG00000285742
novel transcript
-0.0286
58497
ENSG00000285741
novel transcript
-0.0286
58496
ENSG00000285740
novel transcript
-0.0286
58495
ENSG00000285739
novel transcript, antisense to NRG3
-0.0286
58494
ENSG00000285738
Novel transcript
-0.0286
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
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