SHOGoiN Cell Transcriptome: SAMN02870137
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 SAMN02870137 Profile download | 8010000000000000000000-001 | Sequence Read Archive | SRP043513 | SRP043513_T2 | Single Cell RNAseq data and PacBio amplicon sequencing data | Transcriptome | B cell, IgA expressing | Human | Blood | RNA-seq | HiSeq 2000 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000132465 | JCHAIN | joining chain of multimeric IgA and IgM | 137.5573 |
| 2 | ENSG00000211677 | IGLC2 | immunoglobulin lambda constant 2 | 118.5723 |
| 3 | ENSG00000211899 | IGHM | immunoglobulin heavy constant mu | 93.9168 |
| 4 | ENSG00000211648 | IGLV1-47 | immunoglobulin lambda variable 1-47 | 87.3776 |
| 5 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S rRNA | 50.4986 |
| 6 | ENSG00000251562 | MALAT1 | metastasis associated lung adenocarcinoma transcript 1 | 40.1096 |
| 7 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 26.4893 |
| 8 | ENSG00000132464 | ENAM | enamelin | 24.3003 |
| 9 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 19.9224 |
| 10 | ENSG00000198727 | MT-CYB | mitochondrially encoded cytochrome b | 15.1970 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285747 | novel transcript | -0.0286 | |
| 58502 | ENSG00000285746 | putative UPF0607 protein ENSP00000383144 | -0.0286 | |
| 58501 | ENSG00000285745 | general transcription factor IIH subunit 5 (GTF2H5) pseudogene | -0.0286 | |
| 58500 | ENSG00000285744 | novel transcript | -0.0286 | |
| 58499 | ENSG00000285743 | novel transcript, LINP1-LINC00707 readthrough | -0.0286 | |
| 58498 | ENSG00000285742 | novel transcript | -0.0286 | |
| 58497 | ENSG00000285741 | novel transcript | -0.0286 | |
| 58496 | ENSG00000285740 | novel transcript | -0.0286 | |
| 58495 | ENSG00000285739 | novel transcript, antisense to NRG3 | -0.0286 | |
| 58494 | ENSG00000285738 | Novel transcript | -0.0286 |
