What is SHOGoiN

SHOGoiN Cell Database is a repository for accumulating and integrating diverse human cell information to support a wide range of cell research at the single-cell resolution. It is a significant extension of the world-first human cell database,CELLPEDIA (Database 2011). compass The database consists of several modules that store cell lineage maps, transcriptome, methylome, cell conversions, cell type markers, and cell images with morphology data curated from public as well as contracted resources, based on sophisticated cell taxonomy.

What's New

  • Jul-01-2020

    • Database was updated. Taxonomy and Transcriptome were updated. 547 transcriptome samples added.
  • Sep-01-2019

    • Database was updated. Taxonomy and Methylome were updated. 661 methylome samples added.
    • MIACARM was updated. 1 item added.
  • Jun-01-2019

    • Database was updated. Taxonomy and Markers were updated. 56 markers added.

SHOGoiN Assay Data Summary SHOGoiN assay data summary

Data Selector

  • Animal
  • Assay Type
    Transcriptome (3003)
    Methylome (655)
    Cell Marker (2524)
    Image (1793)
  • Tissue Type
    Spleen (1615)
    Early embryonic tissue (1142)
    Brain (706)
    Blood (607)
    Eye (554)
    Bone marrow (369)
    Muscle (343)
    Genitalia (340)
    Pancreas (262)
          Show more

Integrated Stem Cell Database

  • Cell Line Search  
    Updated on 2020/08/07 (25,040 entries)

SKIP Riken eagle-i hPSCreg

SHOGoiN Modules

Assay data modules
  • Easy Marker Search

SHOGoiN Standards and Tools